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LOC108990414 F-box protein GID2-like [ Juglans regia (English walnut) ]

Gene ID: 108990414, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108990414
Gene description
F-box protein GID2-like
Locus tag
F2P56_033945
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108990414 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 15 NC_049915.1 (4251599..4252712)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017443281.1 (84607..85657)

Chromosome 15 - NC_049915.1Genomic Context describing neighboring genes Neighboring gene WD40 repeat-containing protein HOS15-like Neighboring gene MFP1 attachment factor 1-like Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene putative receptor protein kinase ZmPK1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049915.1 Reference Walnut 2.0 Primary Assembly

    Range
    4251599..4252712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018964380.2 → XP_018819925.1  F-box protein GID2-like

    UniProtKB/TrEMBL
    A0A2I4EKK0
    Conserved Domains (1) summary
    pfam12937
    Location:45 → 82
    F-box-like
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases