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LOC108988198 probable galacturonosyltransferase 9 [ Juglans regia (English walnut) ]

Gene ID: 108988198, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108988198
Gene description
probable galacturonosyltransferase 9
Locus tag
F2P56_000868
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108988198 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 1 NC_049901.1 (6726600..6729340, complement)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017443009.1 (1283505..1286248)

Chromosome 1 - NC_049901.1Genomic Context describing neighboring genes Neighboring gene protein GLUTAMINE DUMPER 6-like Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2-like Neighboring gene basic leucine zipper 43-like Neighboring gene E3 ubiquitin-protein ligase CIP8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049901.1 Reference Walnut 2.0 Primary Assembly

    Range
    6726600..6729340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018961359.2 → XP_018816904.1  probable galacturonosyltransferase 9

    UniProtKB/TrEMBL
    A0A2I4EBY8
    Conserved Domains (1) summary
    PLN02523
    Location:1 → 562
    PLN02523; galacturonosyltransferase
Nucleotide Protein
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