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LOC108987498 granule-bound starch synthase 2, chloroplastic/amyloplastic-like [ Juglans regia (English walnut) ]

Gene ID: 108987498, updated on 18-Sep-2024

Summary

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Gene symbol
LOC108987498
Gene description
granule-bound starch synthase 2, chloroplastic/amyloplastic-like
Locus tag
F2P56_021267
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108987498 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 10 NC_049910.1 (1286667..1297999)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017442911.1 (18892..30012)

Chromosome 10 - NC_049910.1Genomic Context describing neighboring genes Neighboring gene DCN1-like protein 3 Neighboring gene pentatricopeptide repeat-containing protein At5g39680-like Neighboring gene amino acid transporter AVT1I-like Neighboring gene gibberellin-regulated protein 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule-bound starch synthase 2, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049910.1 Reference Walnut 2.0 Primary Assembly

    Range
    1286667..1297999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018960424.2 → XP_018815969.1  granule-bound starch synthase 2, chloroplastic/amyloplastic-like

    UniProtKB/TrEMBL
    A0A2I4E9B4
    Conserved Domains (1) summary
    TIGR02095
    Location:294 → 781
    glgA; glycogen/starch synthase, ADP-glucose type

RNA

  1. XR_004802566.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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