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LOC108984789 glucomannan 4-beta-mannosyltransferase 9 [ Juglans regia (English walnut) ]

Gene ID: 108984789, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108984789
Gene description
glucomannan 4-beta-mannosyltransferase 9
Locus tag
F2P56_005739
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC108984789 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 3 NC_049903.1 (751918..757353)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017442546.1 (94529..99428, complement)

Chromosome 3 - NC_049903.1Genomic Context describing neighboring genes Neighboring gene protein PSK SIMULATOR 1-like Neighboring gene AT-hook motif nuclear-localized protein 1-like Neighboring gene pentatricopeptide repeat-containing protein At5g12100, mitochondrial Neighboring gene peroxiredoxin-2E-2, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049903.1 Reference Walnut 2.0 Primary Assembly

    Range
    751918..757353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018956847.2 → XP_018812392.1  glucomannan 4-beta-mannosyltransferase 9

    UniProtKB/TrEMBL
    A0A2I4DZ26
    Conserved Domains (1) summary
    cd06437
    Location:97 → 333
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
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