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mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108941965, updated on 22-Oct-2023

Summary

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Gene symbol
mgat5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSSFOG00015025621
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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Genomic context

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See mgat5 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
17
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 21 NC_041826.1 (1201824..1392128)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372209.1 (1101817..1297610)

Chromosome 21 - NC_041826.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit Neighboring gene uncharacterized LOC114909284 Neighboring gene transmembrane protein 163 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene cyclin T2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041826.1 Reference fSclFor1.1 Primary Assembly

    Range
    1201824..1392128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018764927.2 → XP_018620443.2  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8C9RXC0
    Related
    ENSSFOP00015021340.2, ENSSFOT00015021579.2
    Conserved Domains (2) summary
    pfam15024
    Location:175 → 729
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 141
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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