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piga phosphatidylinositol glycan anchor biosynthesis, class A [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108933132, updated on 14-Mar-2024

Summary

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Gene symbol
piga
Gene description
phosphatidylinositol glycan anchor biosynthesis, class A
See related
Ensembl:ENSSFOG00015002619
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See piga in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (21351793..21354261)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371756.1 (3433635..3436103, complement)

Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene vascular endothelial growth factor D Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene gastrin-releasing peptide receptor-like Neighboring gene LanC like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

    Range
    21351793..21354261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018749963.2 → XP_018605479.2  phosphatidylinositol N-acetylglucosaminyltransferase subunit A

    UniProtKB/TrEMBL
    A0A0P7UGQ1, A0A8C9T3L0
    Related
    ENSSFOP00015042719.1, ENSSFOT00015054375.1
    Conserved Domains (1) summary
    cd03796
    Location:32 → 431
    GT4_PIG-A-like; phosphatidylinositol N-acetylglucosaminyltransferase subunit A and similar proteins
Nucleotide Protein
Heading Accession and Version

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