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zgc:154054 Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108930856, updated on 14-Mar-2024

Summary

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Gene symbol
zgc:154054
Gene description
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like
See related
Ensembl:ENSSFOG00015024023
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
zebrafish all
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Genomic context

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See zgc:154054 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 5 NC_041810.1 (3166038..3182260)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371658.1 (39413..55695)

Chromosome 5 - NC_041810.1Genomic Context describing neighboring genes Neighboring gene spore coat protein SP96-like Neighboring gene uncharacterized LOC108930807 Neighboring gene short coiled-coil protein Neighboring gene mastermind like transcriptional coactivator 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041810.1 Reference fSclFor1.1 Primary Assembly

    Range
    3166038..3182260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018746335.1 → XP_018601851.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1

    UniProtKB/TrEMBL
    A0A8C9VAB3, A0A8C9VW22
    Related
    ENSSFOP00015037740.1, ENSSFOT00015038154.2

  2. XM_018746336.1 → XP_018601852.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X2

    UniProtKB/TrEMBL
    A0A8C9VW22
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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