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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108929403, updated on 14-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
See related
Ensembl:ENSSFOG00015020826
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (43450396..43477481)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371616.1 (266345..274615, complement)

Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene cyclin-dependent kinase 19 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

    Range
    43450396..43477481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029253834.1 → XP_029109667.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9SBR3
    Related
    ENSSFOP00015032588.1, ENSSFOT00015032951.2
    Conserved Domains (5) summary
    smart00547
    Location:736 → 759
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:241 → 551
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:737 → 756
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:112 → 273
    PAT1; Topoisomerase II-associated protein PAT1

  2. XM_029253835.1 → XP_029109668.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A0P7ZFD6
    Related
    ENSSFOP00015032598.1, ENSSFOT00015032963.2
    Conserved Domains (5) summary
    smart00547
    Location:704 → 727
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:241 → 551
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:705 → 724
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:112 → 273
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
Heading Accession and Version

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