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LOC108927871 tight junction protein ZO-2-like [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108927871, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108927871
Gene description
tight junction protein ZO-2-like
See related
Ensembl:ENSSFOG00015020169
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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Genomic context

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See LOC108927871 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 6 NC_041811.1 (316813..333095, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371598.1 (154913..171244)

Chromosome 6 - NC_041811.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene MAM domain-containing protein 2-like Neighboring gene NACHT, LRR and PYD domains-containing protein 3-like Neighboring gene uncharacterized LOC108931914

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041811.1 Reference fSclFor1.1 Primary Assembly

    Range
    316813..333095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018741476.2 → XP_018596992.1  tight junction protein ZO-2-like isoform X2

    UniProtKB/TrEMBL
    A0A0P7W9Z5, A0A8C9SGV6
    Related
    ENSSFOP00015031536.1, ENSSFOT00015031890.2

  2. XM_018741475.2 → XP_018596991.1  tight junction protein ZO-2-like isoform X1

    UniProtKB/TrEMBL
    A0A0P7W9Z5, A0A8C9S793
    Related
    ENSSFOP00015031501.1, ENSSFOT00015031853.2
Nucleotide Protein
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