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lman2la lectin, mannose-binding 2-like a [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108927213, updated on 19-Jun-2024

Summary

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Gene symbol
lman2la
Gene description
lectin, mannose-binding 2-like a
See related
Ensembl:ENSSFOG00015024643
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
zebrafish all
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Genomic context

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See lman2la in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 6 NC_041811.1 (12595064..12602351)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371583.1 (2455230..2462458)

Chromosome 6 - NC_041811.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 13L Neighboring gene mitochondrial fission process 1 Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene WW domain binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041811.1 Reference fSclFor1.1 Primary Assembly

    Range
    12595064..12602351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018740342.2 → XP_018595858.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A0P7YB81, A0A8C9TW95
    Related
    ENSSFOP00015058886.1, ENSSFOT00015066836.1

  2. XM_018740341.2 → XP_018595857.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A0P7YB81
Nucleotide Protein
Heading Accession and Version

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