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rps6 ribosomal protein S6 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108925723, updated on 14-Mar-2024

Summary

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Gene symbol
rps6
Gene description
ribosomal protein S6
See related
Ensembl:ENSSFOG00015002123
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See rps6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 16 NC_041821.1 (10368505..10372135, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371565.1 (3298977..3302585)

Chromosome 16 - NC_041821.1Genomic Context describing neighboring genes Neighboring gene perilipin-2-like Neighboring gene DENN domain containing 4C Neighboring gene alkaline ceramidase 2-like Neighboring gene transfer RNA phenylalanine (anticodon GAA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041821.1 Reference fSclFor1.1 Primary Assembly

    Range
    10368505..10372135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018737889.2 → XP_018593405.1  40S ribosomal protein S6

    UniProtKB/TrEMBL
    A0A0P7VTS0
    Related
    ENSSFOP00015003255.1, ENSSFOT00015003307.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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