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galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108924534, updated on 14-Mar-2024

Summary

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Gene symbol
galnt7
Gene description
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
See related
Ensembl:ENSSFOG00015019762
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See galnt7 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 16 NC_041821.1 (3647857..3656929, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371553.1 (6601814..6610868)

Chromosome 16 - NC_041821.1Genomic Context describing neighboring genes Neighboring gene stimulator of chondrogenesis 1 Neighboring gene high mobility group box 2a Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene family with sequence similarity 193 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
polypeptide N-acetylgalactosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041821.1 Reference fSclFor1.1 Primary Assembly

    Range
    3647857..3656929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029258944.1 → XP_029114777.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C9WA60, A0A8D0C8P1
    Related
    ENSSFOP00015073025.1, ENSSFOT00015065266.1
    Conserved Domains (2) summary
    cd02510
    Location:203 → 511
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:528 → 642
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_029258943.1 → XP_029114776.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C9SV81, A0A8D0C8P1
    Related
    ENSSFOP00015040885.1, ENSSFOT00015050141.1
    Conserved Domains (2) summary
    cd02510
    Location:203 → 511
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:528 → 642
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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