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dcps decapping enzyme, scavenger [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108921345, updated on 14-Mar-2024

Summary

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Gene symbol
dcps
Gene description
decapping enzyme, scavenger
See related
Ensembl:ENSSFOG00015022277
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See dcps in Genome Data Viewer
Location:
chromosome: 25
Exon count:
6
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 25 NC_041830.1 (10583573..10597869, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371526.1 (8210546..8228469)

Chromosome 25 - NC_041830.1Genomic Context describing neighboring genes Neighboring gene G protein-activated inward rectifier potassium channel 4-like Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 Neighboring gene cryptochrome circadian regulator 5 Neighboring gene FAD-dependent oxidoreductase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
m7GpppX diphosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041830.1 Reference fSclFor1.1 Primary Assembly

    Range
    10583573..10597869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018730795.1 → XP_018586311.1  m7GpppX diphosphatase

    UniProtKB/TrEMBL
    A0A8C9SD44
    Related
    ENSSFOP00015034978.1, ENSSFOT00015035361.2
Nucleotide Protein
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Gene LinkOut

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