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Hcf Host cell factor [ Anoplophora glabripennis (Asian longhorned beetle) ]

Gene ID: 108912418, updated on 23-May-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplophora glabripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Chrysomeloidea; Cerambycidae; Lamiinae; Lamiini; Anoplophora
Also known as
HCFC1
Orthologs
fruit fly all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Agla_2.0 (GCF_000390285.2) Unplaced Scaffold NW_019416607.1 (339190..353412)
100 previous assembly Agla_1.0 (GCF_000390285.1) Unplaced Scaffold NW_017373164.1 (338682..352705)

NW_019416607.1Genomic Context describing neighboring genes Neighboring gene DNA-binding protein Ewg Neighboring gene Exocyst complex component Sec6 Neighboring gene gamma-aminobutyric acid type B receptor subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anoplophora glabripennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Agla_2.0 Primary Assembly

Genomic

  1. NW_019416607.1 Reference Agla_2.0 Primary Assembly

    Range
    339190..353412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018717630.1 → XP_018573146.1  host cell factor 2 isoform X2

  2. XM_018717629.1 → XP_018573145.1  host cell factor 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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