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alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit [ Lates calcarifer (barramundi perch) ]

Gene ID: 108898772, updated on 1-Aug-2024

Summary

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Gene symbol
alg14
Gene description
ALG14 UDP-N-acetylglucosaminyltransferase subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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See alg14 in Genome Data Viewer
Location:
chromosome: LG24
Exon count:
4
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG24 NC_066856.1 (6609917..6617532)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365980.1 (191168..199771)

Linkage Group LG24 - NC_066856.1Genomic Context describing neighboring genes Neighboring gene pleiomorphic adenoma gene 1 Neighboring gene v-mos Moloney murine sarcoma viral oncogene homolog Neighboring gene STEAP family member 2, metalloreductase Neighboring gene calponin 3, acidic a Neighboring gene coagulation factor IIIa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG14 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066856.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    6609917..6617532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018698811.2 → XP_018554327.1  UDP-N-acetylglucosamine transferase subunit ALG14 homolog

    UniProtKB/TrEMBL
    A0A4W6ENS6, A0AAJ7QEV7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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