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med23 mediator complex subunit 23 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108896823, updated on 1-Aug-2024

Summary

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Gene symbol
med23
Gene description
mediator complex subunit 23
See related
EnsemblRapid:ENSLCAG00010018185
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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See med23 in Genome Data Viewer
Location:
chromosome: LG7_1
Exon count:
30
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG7_1 NC_066839.1 (14317708..14333673, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365808.1 (1359142..1375589, complement)

Linkage Group LG7_1 - NC_066839.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108896894 Neighboring gene A-kinase anchor protein 7 Neighboring gene uncharacterized LOC108896826 Neighboring gene interleukin 20 receptor, alpha Neighboring gene EH-domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066839.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    14317708..14333673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018696072.2 → XP_018551588.1  LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A4W6EKM7, A0AAJ7QB90
    Related
    ENSLCAP00010039633.2, ENSLCAT00010040573.2
Nucleotide Protein
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Gene LinkOut

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