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LOC108891917 adapter molecule crk [ Lates calcarifer (barramundi perch) ]

Gene ID: 108891917, updated on 10-Apr-2024

Summary

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Gene symbol
LOC108891917
Gene description
adapter molecule crk
See related
EnsemblRapid:ENSLCAG00010015215
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
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Genomic context

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Location:
chromosome: LG20
Exon count:
3
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG20 NC_066852.1 (23302355..23312045)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364847.1 (998149..1007839)

Linkage Group LG20 - NC_066852.1Genomic Context describing neighboring genes Neighboring gene TLC domain containing 3A Neighboring gene smoothelin-like protein 2 Neighboring gene 14-3-3 protein epsilon Neighboring gene uncharacterized LOC108891913

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adapter molecule crk

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066852.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    23302355..23312045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018689270.1 → XP_018544786.1  adapter molecule crk

    UniProtKB/TrEMBL
    A0A4W6E459
    Related
    ENSLCAP00010032312.1, ENSLCAT00010033065.2
Nucleotide Protein
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