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plekha7a pleckstrin homology domain containing, family A member 7a [ Lates calcarifer (barramundi perch) ]

Gene ID: 108889303, updated on 10-Oct-2024

Summary

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Gene symbol
plekha7a
Gene description
pleckstrin homology domain containing, family A member 7a
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
zebrafish all
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Genomic context

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See plekha7a in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
31
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG10 NC_066842.1 (4582152..4705819, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364364.1 (422756..546310)

Linkage Group LG10 - NC_066842.1Genomic Context describing neighboring genes Neighboring gene NLR family CARD domain-containing protein 3 Neighboring gene uncharacterized LOC127142885 Neighboring gene small nucleolar RNA SNORA19 Neighboring gene protein phosphatase 1, regulatory subunit 15B Neighboring gene ribosomal protein S13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066842.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    4582152..4705819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051073171.1 → XP_050929128.1  LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 7

    UniProtKB/TrEMBL
    A0AAJ8DRU7
Nucleotide Protein
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Molecular Biology Databases