U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108877402 torsin-1A-interacting protein 2 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108877402, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC108877402
Gene description
torsin-1A-interacting protein 2
See related
EnsemblRapid:ENSLCAG00010011633
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108877402 in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
10
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG17 NC_066849.1 (11043760..11048751)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367183.1 (203900..208912)

Linkage Group LG17 - NC_066849.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108877399 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066849.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    11043760..11048751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018667424.2 → XP_018522940.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4W6DIZ2, A0A4W6DJ75
    Related
    ENSLCAP00010024864.1, ENSLCAT00010025407.2

  2. XM_051076964.1 → XP_050932921.1  torsin-1A-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0AAJ8DVD8

  3. XM_018667425.2 → XP_018522941.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4W6DIZ2, A0A4W6DJ75
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases