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LOC108861988 UDP-arabinopyranose mutase 3 [ Raphanus sativus (radish) ]

Gene ID: 108861988, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108861988
Gene description
UDP-arabinopyranose mutase 3
Locus tag
Rs2_19971
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108861988 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 5 NC_079515.1 (3116488..3118114, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353143.1 (3418877..3425517, complement)

Chromosome 5 - NC_079515.1Genomic Context describing neighboring genes Neighboring gene regulatory-associated protein of TOR 1 Neighboring gene uncharacterized protein At5g01610 Neighboring gene uncharacterized LOC108836213 Neighboring gene rhodanese-like domain-containing protein 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079515.1 Reference ASM80110v3 Primary Assembly

    Range
    3116488..3118114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057011061.1 → XP_056867041.1  UDP-arabinopyranose mutase 3

    UniProtKB/TrEMBL
    A0A9W3DT34
Nucleotide Protein
Heading Accession and Version

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