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LOC108854630 probable galacturonosyltransferase 7 [ Raphanus sativus (radish) ]

Gene ID: 108854630, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108854630
Gene description
probable galacturonosyltransferase 7
Locus tag
Rs2_17816
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 4 NC_079514.1 (40587531..40590783, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353142.1 (39422020..39434737, complement)

Chromosome 4 - NC_079514.1Genomic Context describing neighboring genes Neighboring gene protein LURP-one-related 8-like Neighboring gene uncharacterized LOC108850998 Neighboring gene bifunctional protein FolD 1, mitochondrial Neighboring gene ethanolamine-phosphate cytidylyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 7
Names
putative galacturonosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079514.1 Reference ASM80110v3 Primary Assembly

    Range
    40587531..40590783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018628235.2 → XP_018483737.2  probable galacturonosyltransferase 7

    UniProtKB/TrEMBL
    A0A6J0NG50
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases