U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108854603 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 [ Raphanus sativus (radish) ]

Gene ID: 108854603, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108854603
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4
Locus tag
Rs2_49845
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) Unplaced Scaffold NW_026617253.1 (86..4392)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353142.1 (4054689..4058747, complement)

NW_026617253.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108854607 Neighboring gene S-protein homolog 9-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NW_026617253.1 Reference ASM80110v3 Primary Assembly

    Range
    86..4392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056999626.1 → XP_056855606.1  LOW QUALITY PROTEIN: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

    UniProtKB/TrEMBL
    A0A9W3CVR1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases