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LOC108854174 probable beta-1,3-galactosyltransferase 4 [ Raphanus sativus (radish) ]

Gene ID: 108854174, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108854174
Gene description
probable beta-1,3-galactosyltransferase 4
Locus tag
Rs2_51286
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108854174 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) Unplaced Scaffold NW_026618320.1 (5249..7914)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353142.1 (4220473..4223050)

NW_026618320.1Genomic Context describing neighboring genes Neighboring gene protein S40-6 Neighboring gene uncharacterized LOC130506229

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Construction of a high-resolution linkage map of Rfd1, a restorer-of-fertility locus for cytoplasmic male sterility conferred by DCGMS cytoplasm in radish (Raphanus sativus L.) using synteny between radish and Arabidopsis genomes. Cho Y, et al. Theor Appl Genet, 2012 Aug. PMID 22434503

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NW_026618320.1 Reference ASM80110v3 Primary Assembly

    Range
    5249..7914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057000862.1 → XP_056856842.1  probable beta-1,3-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A6J0NF67

  2. XM_018627683.2 → XP_018483185.1  probable beta-1,3-galactosyltransferase 4

    UniProtKB/TrEMBL
    A0A6J0NF67
Nucleotide Protein
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