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LOC108829842 uncharacterized LOC108829842 [ Raphanus sativus (radish) ]

Gene ID: 108829842, updated on 14-Jun-2023

Summary

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Gene symbol
LOC108829842
Gene description
uncharacterized LOC108829842
Locus tag
Rs2_09275
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Also known as
GOLD
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 3 NC_079513.1 (1625330..1629315, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353259.1 (78960..82944, complement)

Chromosome 3 - NC_079513.1Genomic Context describing neighboring genes Neighboring gene type III polyketide synthase C Neighboring gene probable WRKY transcription factor 62 Neighboring gene E3 ubiquitin-protein ligase HAKAI homolog Neighboring gene mechanosensitive ion channel protein 1, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC108829842

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079513.1 Reference ASM80110v3 Primary Assembly

    Range
    1625330..1629315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018603435.2 → XP_018458937.1  uncharacterized protein LOC108829842

    UniProtKB/TrEMBL
    A0A6J0LFV5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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