U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108826879 beta-1,2-xylosyltransferase [ Raphanus sativus (radish) ]

Gene ID: 108826879, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108826879
Gene description
beta-1,2-xylosyltransferase
Locus tag
Rs2_40503
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 9 NC_079519.1 (8328152..8330580, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353147.1 (9369824..9371970, complement)

Chromosome 9 - NC_079519.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM22-3 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene protein GAMETE EXPRESSED 1 Neighboring gene glycerophosphodiester phosphodiesterase GDPDL4 Neighboring gene uncharacterized LOC130499572

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: beta-1,2-xylosyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079519.1 Reference ASM80110v3 Primary Assembly

    Range
    8328152..8330580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018600222.2 → XP_018455724.1  LOW QUALITY PROTEIN: beta-1,2-xylosyltransferase

    UniProtKB/TrEMBL
    A0A6J0L869
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases