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LOC108824524 beta-arabinofuranosyltransferase RAY1 [ Raphanus sativus (radish) ]

Gene ID: 108824524, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108824524
Gene description
beta-arabinofuranosyltransferase RAY1
Locus tag
Rs2_39778
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108824524 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 9 NC_079519.1 (3350626..3353774, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353147.1 (3717995..3719754)

Chromosome 9 - NC_079519.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein VAR3, chloroplastic-like Neighboring gene uncharacterized LOC108826623 Neighboring gene uncharacterized LOC108823618 Neighboring gene 60S ribosomal protein L27a-3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-arabinofuranosyltransferase RAY1
Names
Nucleotide-diphospho-sugar transferase family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079519.1 Reference ASM80110v3 Primary Assembly

    Range
    3350626..3353774 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056994048.1 → XP_056850028.1  beta-arabinofuranosyltransferase RAY1

    UniProtKB/TrEMBL
    A0A9W3CF96
Nucleotide Protein
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