U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108821991 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Raphanus sativus (radish) ]

Gene ID: 108821991, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108821991
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Locus tag
Rs2_45454
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108821991 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) Unplaced Scaffold NW_026615545.1 (16085..18700, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353146.1 (4675637..4678136, complement)

NW_026615545.1Genomic Context describing neighboring genes Neighboring gene bidirectional sugar transporter SWEET1 Neighboring gene probable beta-1,4-xylosyltransferase IRX10 Neighboring gene uncharacterized protein At1g21580-like Neighboring gene protein kinase STUNTED

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NW_026615545.1 Reference ASM80110v3 Primary Assembly

    Range
    16085..18700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018595002.2 → XP_018450504.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0KTS6

  2. XM_056996440.1 → XP_056852420.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9W3CLK7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases