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LOC108821920 anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase [ Raphanus sativus (radish) ]

Gene ID: 108821920, updated on 9-Nov-2023

Summary

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Gene symbol
LOC108821920
Gene description
anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase
Locus tag
Rs2_40668
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 9 NC_079519.1 (9675224..9676876)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353146.1 (22378659..22380316)

Chromosome 9 - NC_079519.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 71B14 Neighboring gene uncharacterized LOC108821644 Neighboring gene protein CUP-SHAPED COTYLEDON 2 Neighboring gene protein yippee-like At5g53940

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079519.1 Reference ASM80110v3 Primary Assembly

    Range
    9675224..9676876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018594912.2 → XP_018450414.2  anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase

    UniProtKB/TrEMBL
    A0A6J0KTJ6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases