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LOC108818213 uncharacterized LOC108818213 [ Raphanus sativus (radish) ]

Gene ID: 108818213, updated on 9-Nov-2023

Summary

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Gene symbol
LOC108818213
Gene description
uncharacterized LOC108818213
Locus tag
Rs2_34285
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 7 NC_079517.1 (10296684..10298641, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353145.1 (12521317..12523401, complement)

Chromosome 7 - NC_079517.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108814879 Neighboring gene uncharacterized LOC108814099 Neighboring gene uncharacterized LOC130497475 Neighboring gene BTB/POZ domain-containing protein At1g67900

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC108818213

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079517.1 Reference ASM80110v3 Primary Assembly

    Range
    10296684..10298641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018591112.2 → XP_018446614.1  uncharacterized protein LOC108818213

    UniProtKB/TrEMBL
    A0A6J0KHS5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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