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LOC108810298 1-aminocyclopropane-1-carboxylate oxidase 5-like [ Raphanus sativus (radish) ]

Gene ID: 108810298, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108810298
Gene description
1-aminocyclopropane-1-carboxylate oxidase 5-like
Locus tag
Rs2_34750
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108810298 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 7 NC_079517.1 (13919146..13920890, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353144.1 (27992719..27994330)

Chromosome 7 - NC_079517.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130497557 Neighboring gene uncharacterized LOC130498032 Neighboring gene caffeoylshikimate esterase-like Neighboring gene protein CELLULOSE SYNTHASE INTERACTIVE 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-aminocyclopropane-1-carboxylate oxidase 5-like
Names
1-aminocyclopropane-1-carboxylate oxidase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079517.1 Reference ASM80110v3 Primary Assembly

    Range
    13919146..13920890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056990412.1 → XP_056846392.1  1-aminocyclopropane-1-carboxylate oxidase 5-like

    UniProtKB/TrEMBL
    A0A9W3C4I4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases