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LOC108809515 UDP-glycosyltransferase 72E2 [ Raphanus sativus (radish) ]

Gene ID: 108809515, updated on 9-Nov-2023

Summary

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Gene symbol
LOC108809515
Gene description
UDP-glycosyltransferase 72E2
Locus tag
Rs2_30801
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108809515 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 6 NC_079516.1 (45065732..45067658, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353144.1 (43386594..43388389, complement)

Chromosome 6 - NC_079516.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 80 Neighboring gene serine/threonine-protein kinase STY17 Neighboring gene homeobox-leucine zipper protein ATHB-53 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit Neighboring gene UPF0496 protein At5g66670-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase 72E2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079516.1 Reference ASM80110v3 Primary Assembly

    Range
    45065732..45067658 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018581652.2 → XP_018437154.1  UDP-glycosyltransferase 72E2

    UniProtKB/TrEMBL
    A0A6J0JQV2
Nucleotide Protein
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