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LOC108807398 xyloglucan glycosyltransferase 4-like [ Raphanus sativus (radish) ]

Gene ID: 108807398, updated on 20-Nov-2023

Summary

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Gene symbol
LOC108807398
Gene description
xyloglucan glycosyltransferase 4-like
Locus tag
Rs2_27967
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC108807398 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 6 NC_079516.1 (16730088..16735148, complement)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353144.1 (17020679..17024252, complement)

Chromosome 6 - NC_079516.1Genomic Context describing neighboring genes Neighboring gene F-box protein At3g28330-like Neighboring gene peroxidase 31-like Neighboring gene WAT1-related protein At3g28100 Neighboring gene WAT1-related protein At3g28050

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan glycosyltransferase 4-like
Names
Xyloglucan glycosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079516.1 Reference ASM80110v3 Primary Assembly

    Range
    16730088..16735148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018579679.2 → XP_018435181.1  xyloglucan glycosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A6J0JJI3
Nucleotide Protein
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