U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108805072 probable starch synthase 4, chloroplastic/amyloplastic [ Raphanus sativus (radish) ]

Gene ID: 108805072, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC108805072
Gene description
probable starch synthase 4, chloroplastic/amyloplastic
Locus tag
Rs2_23962
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108805072 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 5 NC_079515.1 (32467596..32471482)
100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353143.1 (38386417..38390423)

Chromosome 5 - NC_079515.1Genomic Context describing neighboring genes Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 6 Neighboring gene leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 Neighboring gene probable sphingolipid transporter spinster homolog 1 Neighboring gene phosphoenolpyruvate carboxykinase (ATP) 2 Neighboring gene uncharacterized LOC130495260

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
probable starch synthase 4, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079515.1 Reference ASM80110v3 Primary Assembly

    Range
    32467596..32471482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018577025.2 → XP_018432527.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X1

    UniProtKB/TrEMBL
    A0A6J0JAA3

  2. XM_018577026.2 → XP_018432528.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X2

    UniProtKB/TrEMBL
    A0A6J0JA40
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases