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AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase [ Nanorana parkeri ]

Gene ID: 108799770, updated on 20-Oct-2024

Summary

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Gene symbol
AGL
Gene description
amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Nanorana parkeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
Orthologs
human mouse all
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Genomic context

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See AGL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017308077.1 (2638..67215, complement)

NW_017308077.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1 Neighboring gene nitric oxide synthase 1 adaptor protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017308077.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen debranching enzyme
Names
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM93562v1 Primary Assembly

Genomic

  1. NW_017308077.1 Reference ASM93562v1 Primary Assembly

    Range
    2638..67215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018571684.1 → XP_018427186.1  glycogen debranching enzyme isoform X1

  2. XM_018571683.1 → XP_018427185.1  glycogen debranching enzyme isoform X1

  3. XM_018571685.1 → XP_018427187.1  glycogen debranching enzyme isoform X2

Nucleotide Protein
Heading Accession and Version

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