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LOC108797255 type 2 lactosamine alpha-2,3-sialyltransferase-like [ Nanorana parkeri ]

Gene ID: 108797255, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108797255
Gene description
type 2 lactosamine alpha-2,3-sialyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nanorana parkeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC108797255 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017307518.1 (448700..512441)

NW_017307518.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit rho3 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017307518.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM93562v1 Primary Assembly

Genomic

  1. NW_017307518.1 Reference ASM93562v1 Primary Assembly

    Range
    448700..512441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018568826.1 → XP_018424328.1  type 2 lactosamine alpha-2,3-sialyltransferase-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases