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SPTAN1 spectrin alpha, non-erythrocytic 1 [ Nanorana parkeri ]

Gene ID: 108794467, updated on 14-Mar-2024

Summary

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Gene symbol
SPTAN1
Gene description
spectrin alpha, non-erythrocytic 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nanorana parkeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
Orthologs
human mouse all
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Genomic context

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See SPTAN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
57
Annotation release Status Assembly Chr Location
100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017307122.1 (434977..524760, complement)

NW_017307122.1Genomic Context describing neighboring genes Neighboring gene SET nuclear proto-oncogene Neighboring gene dynein 2 intermediate chain 2 Neighboring gene GLE1 RNA export mediator Neighboring gene outer dense fiber of sperm tails 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017307122.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spectrin alpha chain, non-erythrocytic 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM93562v1 Primary Assembly

Genomic

  1. NW_017307122.1 Reference ASM93562v1 Primary Assembly

    Range
    434977..524760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018565511.1 → XP_018421013.1  spectrin alpha chain, non-erythrocytic 1 isoform X4

  2. XM_018565510.1 → XP_018421012.1  spectrin alpha chain, non-erythrocytic 1 isoform X3

  3. XM_018565509.1 → XP_018421011.1  spectrin alpha chain, non-erythrocytic 1 isoform X2

  4. XM_018565508.1 → XP_018421010.1  spectrin alpha chain, non-erythrocytic 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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