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COL11A1 collagen type XI alpha 1 chain [ Nanorana parkeri ]

Gene ID: 108788524, updated on 14-Mar-2024

Summary

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Gene symbol
COL11A1
Gene description
collagen type XI alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Nanorana parkeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
Orthologs
human mouse all
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Genomic context

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See COL11A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
68
Annotation release Status Assembly Chr Location
100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017306598.1 (503803..703423)

NW_017306598.1Genomic Context describing neighboring genes Neighboring gene pancreatic alpha-amylase-like Neighboring gene RNA binding region (RNP1, RRM) containing 3 Neighboring gene olfactomedin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017306598.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(XI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM93562v1 Primary Assembly

Genomic

  1. NW_017306598.1 Reference ASM93562v1 Primary Assembly

    Range
    503803..703423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018558297.1 → XP_018413799.1  collagen alpha-1(XI) chain isoform X1

  2. XM_018558298.1 → XP_018413800.1  collagen alpha-1(XI) chain isoform X2

  3. XM_018558302.1 → XP_018413804.1  collagen alpha-1(XI) chain isoform X5

  4. XM_018558299.1 → XP_018413801.1  collagen alpha-1(XI) chain isoform X3

  5. XM_018558301.1 → XP_018413803.1  collagen alpha-1(XI) chain isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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