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DES desmin [ Nanorana parkeri ]

Gene ID: 108785786, updated on 14-Mar-2024

Summary

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Gene symbol
DES
Gene description
desmin
Gene type
protein coding
RefSeq status
MODEL
Organism
Nanorana parkeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
Orthologs
human mouse all
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Genomic context

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See DES in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017306446.1 (1768445..1795480, complement)

NW_017306446.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1A chain-like Neighboring gene striated muscle enriched protein kinase Neighboring gene striated muscle preferentially expressed protein kinase-like Neighboring gene aspartyl aminopeptidase Neighboring gene receptor-type tyrosine-protein phosphatase-like N Neighboring gene uncharacterized LOC108785790

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017306446.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in skeletal muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desmin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM93562v1 Primary Assembly

Genomic

  1. NW_017306446.1 Reference ASM93562v1 Primary Assembly

    Range
    1768445..1795480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018554936.1 → XP_018410438.1  desmin isoform X4

  2. XM_018554935.1 → XP_018410437.1  desmin isoform X3

  3. XM_018554933.1 → XP_018410435.1  desmin isoform X1

  4. XM_018554934.1 → XP_018410436.1  desmin isoform X2

Nucleotide Protein
Heading Accession and Version

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