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Gyg glycogenin 1 [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108743788, updated on 8-Oct-2024

Summary

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Gene symbol
Gyg
Gene description
glycogenin 1
See related
EnsemblRapid:LOC108743788
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See Gyg in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020439550.1 (6645..9554, complement)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017261752.1 (7276..9554, complement)

NW_020439550.1Genomic Context describing neighboring genes Neighboring gene evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial Neighboring gene GTP-binding protein Rheb homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020439550.1 Reference Apla_2.0 Primary Assembly

    Range
    6645..9554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025979367.1 → XP_025835152.1  glycogenin-1

    UniProtKB/TrEMBL
    A0A7F5RGM5
    Related
    XP_025835152.1, XM_025979367.1
    Conserved Domains (1) summary
    cd02537
    Location:13 → 260
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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