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Pgant5 polypeptide N-acetylgalactosaminyltransferase 5 [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108739550, updated on 24-May-2024

Summary

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Gene symbol
Pgant5
Gene description
polypeptide N-acetylgalactosaminyltransferase 5
See related
EnsemblRapid:LOC108739550
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020439296.1 (289389..364921)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259813.1 (202217..277181)

NW_020439296.1Genomic Context describing neighboring genes Neighboring gene aldose 1-epimerase-like Neighboring gene uncharacterized LOC112905602 Neighboring gene uncharacterized LOC108739546 Neighboring gene serine/threonine-protein kinase RIO3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020439296.1 Reference Apla_2.0 Primary Assembly

    Range
    289389..364921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025978342.1 → XP_025834127.1  polypeptide N-acetylgalactosaminyltransferase 5

    UniProtKB/TrEMBL
    A0A7F5RDS2
    Related
    XP_025834127.1, XM_025978342.1
    Conserved Domains (2) summary
    cd02510
    Location:163 → 463
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:476 → 592
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases