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LOC108736593 GDP-fucose protein O-fucosyltransferase 1 [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108736593, updated on 21-Dec-2023

Summary

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Gene symbol
LOC108736593
Gene description
GDP-fucose protein O-fucosyltransferase 1
See related
EnsemblRapid:LOC108736593
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
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Genomic context

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See LOC108736593 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020439204.1 (757045..758816, complement)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259710.1 (755988..757764, complement)

NW_020439204.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108736594 Neighboring gene GDP-fucose protein O-fucosyltransferase 1-like Neighboring gene NADH dehydrogenase (ubiquinone) 13 kDa A subunit Neighboring gene ATP-dependent RNA helicase 25E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020439204.1 Reference Apla_2.0 Primary Assembly

    Range
    757045..758816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018469064.2 → XP_018324566.1  GDP-fucose protein O-fucosyltransferase 1

    UniProtKB/TrEMBL
    A0A1W4WKV2
    Related
    XP_018324566.1, XM_018469064.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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