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LOC108736348 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108736348, updated on 10-May-2024

Summary

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Gene symbol
LOC108736348
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
See related
EnsemblRapid:LOC108736348
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
Orthologs
fruit fly all
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Genomic context

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See LOC108736348 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020438927.1 (159720..161365)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259703.1 (160067..161673)

NW_020438927.1Genomic Context describing neighboring genes Neighboring gene dolichol kinase Neighboring gene uncharacterized LOC108736346 Neighboring gene J domain-containing protein CG6693-like Neighboring gene ribosomal protein L24 Neighboring gene myc box-dependent-interacting protein 1 Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 mapmodulin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020438927.1 Reference Apla_2.0 Primary Assembly

    Range
    159720..161365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018468739.2 → XP_018324241.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

    UniProtKB/TrEMBL
    A0A1W4WJZ2
    Related
    XP_018324241.1, XM_018468739.2

  2. XM_018468740.2 → XP_018324242.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

    UniProtKB/TrEMBL
    A0A1W4WJZ2
    Related
    XP_018324242.1, XM_018468740.2

  3. XM_018468742.2 → XP_018324244.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

    UniProtKB/TrEMBL
    A0A1W4WJZ2
    Related
    XP_018324244.1, XM_018468742.2
Nucleotide Protein
Heading Accession and Version

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