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rt Protein O-mannosyltransferase rt [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108735579, updated on 22-May-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
See related
EnsemblRapid:LOC108735579
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020438978.1 (70923..82757, complement)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259685.1 (70828..82650, complement)

NW_020438978.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase I, mitochondrial Neighboring gene uncharacterized LOC112904723 Neighboring gene uncharacterized LOC112904724 Neighboring gene uncharacterized LOC112904722 Neighboring gene uncharacterized LOC108735572 Neighboring gene uncharacterized LOC108735562

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020438978.1 Reference Apla_2.0 Primary Assembly

    Range
    70923..82757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018467583.1 → XP_018323085.1  protein O-mannosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1W4WSS5
    Related
    XP_018323085.1, XM_018467583.1

  2. XM_018467582.1 → XP_018323084.1  protein O-mannosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1W4WGN3
    Related
    XP_018323084.1, XM_018467582.1

  3. XM_018467584.1 → XP_018323086.1  protein O-mannosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1W4WGK0
    Related
    XP_018323086.1, XM_018467584.1

RNA

  1. XR_001937609.1 RNA Sequence

    Related
    XR_001937609.1
Nucleotide Protein
Heading Accession and Version

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