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sfl N-deacetylase and N-sulfotransferase sfl [ Agrilus planipennis (emerald ash borer) ]

Gene ID: 108735004, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
See related
EnsemblRapid:LOC108735004
Gene type
protein coding
RefSeq status
MODEL
Organism
Agrilus planipennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
Orthologs
fruit fly all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020438950.1 (236798..292413, complement)
100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017259669.1 (236837..291800, complement)

NW_020438950.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108735010 Neighboring gene flocculation protein FLO11 Neighboring gene sialin-like Neighboring gene pupal cuticle protein Edg-84A-like Neighboring gene cuticle protein 21-like Neighboring gene cuticle protein 8 Neighboring gene cuticle protein 19-like Neighboring gene cuticle protein 6 Neighboring gene uncharacterized LOC108735006 Neighboring gene IQ domain-containing protein K-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Apla_2.0 Primary Assembly

Genomic

  1. NW_020438950.1 Reference Apla_2.0 Primary Assembly

    Range
    236798..292413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018466785.2 → XP_018322287.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A1W4WQ95
    Related
    XP_018322287.1, XM_018466785.2

  2. XM_018466786.1 → XP_018322288.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A1W4WQ95
    Related
    XP_018322288.1, XM_018466786.1

  3. XM_018466784.2 → XP_018322286.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A1W4WQ95
    Related
    XP_018322286.1, XM_018466784.2
Nucleotide Protein
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