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st8sia6.S ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108719874, updated on 18-Sep-2024

Summary

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Official Symbol
st8sia6.S
Official Full Name
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 S homeolog
Primary source
Xenbase:XB-GENE-17344499
Locus tag
XELAEV_18032927mg
See related
EnsemblRapid:ENSXLAG00005029780
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See st8sia6.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (21480094..21533809)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (21131165..21184202)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene signal transducing adaptor molecule S homeolog Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 S homeolog Neighboring gene uncharacterized LOC121395002 Neighboring gene vimentin S homeolog Neighboring gene uncharacterized LOC121395003

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within N-glycan processing IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    21480094..21533809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041567439.1 → XP_041423373.1  alpha-2,8-sialyltransferase 8F isoform X2

    UniProtKB/TrEMBL
    A0A8J1L1H5

  2. XM_018269131.2 → XP_018124620.1  alpha-2,8-sialyltransferase 8F isoform X1

    UniProtKB/TrEMBL
    A0A1L8FQU6, A0A974HDY3
    Related
    ENSXLAP00005089132.1, ENSXLAT00005090801.1
Nucleotide Protein Strain
Heading Accession and Version

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