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cacnb2.S calcium channel, voltage-dependent, beta 2 subunit S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108719866, updated on 17-Aug-2024

Summary

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Official Symbol
cacnb2.S
Official Full Name
calcium channel, voltage-dependent, beta 2 subunit S homeolog
Primary source
Xenbase:XB-GENE-17337911
Locus tag
XELAEV_18032922mg
See related
EnsemblRapid:ENSXLAG00005029111
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See cacnb2.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (21041872..21228432, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (20692778..20824575, complement)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene plexin domain containing 2 S homeolog Neighboring gene uncharacterized LOC121394999 Neighboring gene ADP ribosylation factor like GTPase 5B S homeolog Neighboring gene solute carrier family 39 (zinc transporter), member 12 S homeolog Neighboring gene mannose receptor C-type 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of monoatomic ion channel complex IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
  
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
voltage-dependent L-type calcium channel subunit beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    21041872..21228432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041567433.1 → XP_041423367.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X6

    UniProtKB/TrEMBL
    A0A8J1L1E7, A0A974CKM2
    Conserved Domains (2) summary
    cl17036
    Location:101 → 168
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:240 → 411
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  2. XM_041567429.1 → XP_041423363.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    A0A8J1L1G5, A0A974CKM2
    Conserved Domains (2) summary
    cl17036
    Location:101 → 168
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:279 → 450
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  3. XM_041567434.1 → XP_041423368.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X7

    UniProtKB/TrEMBL
    A0A8J1L1H0, A0A974CKM2
    Conserved Domains (2) summary
    cl17036
    Location:101 → 168
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:240 → 411
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  4. XM_041567430.1 → XP_041423364.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A8J1L317, A0A974CKM2
    Related
    ENSXLAP00005087417.1, ENSXLAT00005089079.1
    Conserved Domains (2) summary
    cl17036
    Location:101 → 168
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:279 → 450
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  5. XM_041567435.1 → XP_041423369.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X8

    UniProtKB/TrEMBL
    A0A8J1L322, A0A974CKM2
    Related
    ENSXLAP00005087333.1, ENSXLAT00005088995.1
    Conserved Domains (2) summary
    cl17036
    Location:58 → 125
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:236 → 407
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  6. XM_041567431.1 → XP_041423365.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A8J1L458, A0A974CKM2
    Related
    ENSXLAP00005087196.1, ENSXLAT00005088858.1
    Conserved Domains (3) summary
    TIGR01622
    Location:486 → 615
    SF-CC1; splicing factor, CC1-like family
    cl17036
    Location:69 → 136
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:247 → 418
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  7. XM_041567436.1 → XP_041423370.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X9

    UniProtKB/TrEMBL
    A0A8J1L463, A0A974CKM2
    Related
    ENSXLAP00005087074.1, ENSXLAT00005088737.1
    Conserved Domains (2) summary
    cl17036
    Location:53 → 120
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:231 → 402
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  8. XM_041567437.1 → XP_041423371.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X10

    UniProtKB/TrEMBL
    A0A8J1L1F1, A0A974CKM2
    Conserved Domains (2) summary
    cl17036
    Location:65 → 132
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:204 → 375
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  9. XM_041567432.1 → XP_041423366.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X4

    UniProtKB/TrEMBL
    A0A8J1L1E6, A0A974CKM2
    Conserved Domains (2) summary
    cl17036
    Location:65 → 132
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:243 → 414
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  10. XM_018269120.2 → XP_018124609.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X5

    UniProtKB/TrEMBL
    A0A8J0VQ56, A0A974CKM2
    Related
    ENSXLAP00005086998.1, ENSXLAT00005088660.1
Nucleotide Protein Strain
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