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galnt1.L polypeptide N-acetylgalactosaminyltransferase 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108719065, updated on 17-Aug-2024

Summary

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Official Symbol
galnt1.L
Official Full Name
polypeptide N-acetylgalactosaminyltransferase 1 L homeolog
Primary source
Xenbase:XB-GENE-17344896
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
Galntl-1; galnac-t1
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Genomic context

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See galnt1.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (78012417..78033297, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (71787776..71824336, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene BAG cochaperone 1 L homeolog Neighboring gene DOMON domain-containing protein FRRS1L Neighboring gene uncharacterized LOC121394666 Neighboring gene transmembrane protein 245 Neighboring gene uncharacterized LOC121394667

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    78012417..78033297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041566219.1 → XP_041422153.1  polypeptide N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A8J1KZI0
    Conserved Domains (2) summary
    cd00161
    Location:76 → 154
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:32 → 63
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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