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pigm.L phosphatidylinositol glycan anchor biosynthesis class M L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108719045, updated on 18-Sep-2024

Summary

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Official Symbol
pigm.L
Official Full Name
phosphatidylinositol glycan anchor biosynthesis class M L homeolog
Primary source
Xenbase:XB-GENE-17334883
Locus tag
XELAEV_18031359mg
See related
EnsemblRapid:ENSXLAG00005006706
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See pigm.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (73532652..73546434)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (67718514..67731435)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 4 L homeolog Neighboring gene ankyrin repeat and SAM domain-containing protein 6 Neighboring gene programmed cell death 6 L homeolog Neighboring gene aryl-hydrocarbon receptor repressor L homeolog Neighboring gene uncharacterized LOC121394651 Neighboring gene zinc finger, NFX1-type containing 1, gene 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within GPI anchor metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    73532652..73546434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018267637.2 → XP_018123126.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8FX52, A0A974CNN4
    Related
    ENSXLAP00005019811.1, ENSXLAT00005020191.1

  2. XM_018267638.2 → XP_018123127.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8FX52, A0A974CNN4

  3. XM_018267639.2 → XP_018123128.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A1L8FX52, A0A974CNN4
Nucleotide Protein Strain
Heading Accession and Version

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