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stt3b.L STT3B, catalytic subunit of the oligosaccharyltransferase complex L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108718938, updated on 4-Nov-2024

Summary

Official Symbol
stt3b.L
Official Full Name
STT3B, catalytic subunit of the oligosaccharyltransferase complex L homeolog
Primary source
Xenbase:XB-GENE-17341012
Locus tag
XELAEV_18031081mg
See related
EnsemblRapid:ENSXLAG00005010654 AllianceGenome:Xenbase:XB-GENE-17341012
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable dolichyl-diphosphooligosaccharide-protein glycotransferase activity and metal ion binding activity. Predicted to act upstream of or within post-translational protein modification and protein N-linked glycosylation via asparagine. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ix. Orthologous to human STT3B (STT3 oligosaccharyltransferase complex catalytic subunit B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See stt3b.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (51781667..51824271)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (47809427..47851724)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene glutamate decarboxylase like 1 L homeolog Neighboring gene uncharacterized LOC108718937 Neighboring gene oxysterol binding protein like 10 L homeolog Neighboring gene glycerol-3-phosphate dehydrogenase 1 like L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Names
STT3B, subunit of the oligosaccharyltransferase complex (catalytic) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    51781667..51824271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018267473.2XP_018122962.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A1L8FWE4, A0A974CLY2
    Related
    ENSXLAP00005031422.1, ENSXLAT00005032192.1