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c4h19orf12.S chromosome 4 C19orf12 homolog S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108715450, updated on 4-Nov-2024

Summary

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Official Symbol
c4h19orf12.S
Official Full Name
chromosome 4 C19orf12 homolog S homeolog
Primary source
Xenbase:XB-GENE-6486640
Locus tag
XELAEV_18024963mg
See related
EnsemblRapid:ENSXLAG00005018261 AllianceGenome:Xenbase:XB-GENE-6486640
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
c19orf12; c19orf12.S
Summary
Predicted to be located in mitochondrial membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 43 and neurodegeneration with brain iron accumulation 4. Orthologous to human C19orf12 (chromosome 19 open reading frame 12). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See c4h19orf12.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (53233135..53238736)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (47189324..47194896)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein F13E9.13, mitochondrial Neighboring gene cyclin E1 S homeolog Neighboring gene pleckstrin homology and FYVE domain containing 1 S homeolog Neighboring gene V-set and transmembrane domain containing 2B S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein C19orf12 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    53233135..53238736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018260606.2 → XP_018116095.1  protein C19orf12 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0V1Z5
    Related
    ENSXLAP00005053896.1, ENSXLAT00005055066.1

  2. XM_018260607.2 → XP_018116096.1  protein C19orf12 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0V5L4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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